Summary
Overview
Work History
Education
Skills
Languages
Timeline
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LAIS ARAUJO COELHO

New York,NY

Summary

Evolutionary biologist with a strong computational background and vast experience in the development and implementation of cutting-edge analytical pipelines for multi-omics data sets, including large-scale whole genome sequencing, transcriptomics (RNA-seq), and metagenomics across a range of species.

Proficient in designing and optimizing bioinformatic workflows to extract meaningful insights from complex biological data. Skilled in data preprocessing, quality control, and statistical analysis to draw information from multiple fields of life sciences and uncover hidden patterns of biological significance. Training and research experience includes approximate Bayesian computation, Bayesian inference, statistical modeling, and machine-learning–based approaches for extracting biological insight from complex datasets. Adept at utilizing computational tools and programming languages (e.g., Python, R, bash) to address diverse biological questions. Collaborative researcher with a track record of successful interdisciplinary projects and publications. Particularly interested in applying these skills to translational and therapeutic research in a collaborative biotechnology environment.

Overview

2
2
Languages
11
11
years of professional experience

Work History

Visiting Lecturer

PRATT INSTITUTE
Brooklyn, NY
01.2022 - Current
  • Taught undergraduate courses in evolution and ecology, environment in the anthropocene, translating complex biological concepts into clear, accessible explanations for diverse student audiences.
  • Developed and communicated scientific material tailored for audiences with varying levels of quantitative and biological expertise, enhancing understanding and engagement.

Postdoctoral Research Fellow

SUNY DOWNSTATE
Brooklyn, NY
01.2021 - 01.2023
  • Conducted whole-genome and SNP-based demographic reconstruction of an endangered pine, integrating large-scale genomic data with population-genetic models.
  • Performed RNA-seq analyses of white-footed mice under different Lyme disease exposure conditions, applying computational approaches to high-dimensional biological data.
  • Analyzed amplicon-sequencing datasets from duodenal aspirates to characterize gut microbiome data.
  • Applied reproducible computational analysis, data filtering, and statistical interpretation across distinct biological datasets and research questions.

Consultant

AMERICAN MUSEUM OF NATURAL HISTORY
New York, NY
01.2020 - 01.2021
  • Developed scientific storylines focused on Amazonian plants and animals for an immersive museum exhibition.
  • Simplified research findings in ecology, botany, behavioral biology, and evolutionary biology for artists and video producers, facilitating effective communication of complex concepts to non-specialist audiences.

Ph.D. Candidate

COLUMBIA UNIVERSITY
New York, NY
01.2016 - 01.2020
  • Automated Unix and R scripts to efficiently harvest, process, and analyze genetic variants from large genomic datasets, generating standardized inputs for downstream analyses.

Used Python-based Bioconda packages to filter structural and single-nucleotide variants in approximately 200 GB of whole-genome data from Amazonian birds.

  • Applied Approximate Bayesian Computation (ABC) and population-genetic modeling to analyze genomic data, evaluating competing hypotheses about population history and demographic change.

Education

Ph.D. - Ecology, Evolution and Environmental Biology

Columbia University
New York, NY
01-2020

M.S. - Ecology

Instituto Nacional de Pesquisas da Amazônia (INPA)
Manaus, Brazil
01-2011

B.S. - Biology

Universidade de Brasília (UnB)
Brasília, Brazil
01-2008

Skills

  • Computational biology: Bioinformatic workflows, genomic variant analysis, population genetics, comparative genomics, multi-omics analysis
  • Data types: Whole-genome sequencing, SNP/structural variants, RNA-seq, amplicon sequencing
  • Analysis & QC: Data preprocessing, filtering, quality control, statistical analysis, demographic inference, data integration
  • Programming & scripting: Python, R, Unix/Bash, High-performance computing
  • Bioinformatics tools: BWA, GATK, Picard, VCFtools, PLINK, Bioconda, Git/version control
  • Scientific communication: Data interpretation, technical documentation, interdisciplinary collaboration, undergraduate teaching

Languages

Portuguese
Native/ Bilingual
English
Native/ Bilingual

Timeline

Visiting Lecturer

PRATT INSTITUTE
01.2022 - Current

Postdoctoral Research Fellow

SUNY DOWNSTATE
01.2021 - 01.2023

Consultant

AMERICAN MUSEUM OF NATURAL HISTORY
01.2020 - 01.2021

Ph.D. Candidate

COLUMBIA UNIVERSITY
01.2016 - 01.2020

Ph.D. - Ecology, Evolution and Environmental Biology

Columbia University

M.S. - Ecology

Instituto Nacional de Pesquisas da Amazônia (INPA)

B.S. - Biology

Universidade de Brasília (UnB)
LAIS ARAUJO COELHO