Summary
Overview
Work History
Education
Skills
Timeline
Generic

Ming Chen

Senior Bioinformatics Engineer
Tianjin,Tianjin

Summary

  • Highly motivated and passionate bioinformatics professional with over 7 years of experience in the scientific service industry. I possess a strong technical and academic background, with extensive expertise in multi-omics data analysis, including WES, WGS, scRNA-seq, scATAC-seq, and spatial transcriptomics. I have successfully led and completed numerous complex bioinformatics projects, demonstrating proficiency in solving challenging scientific problems and delivering impactful results.
  • Driven by a deep commitment to advancing knowledge in bioinformatics, I am now seeking a PhD program to further my academic pursuits and contribute to cutting-edge research. With a proven track record of technical excellence and a dedication to innovation, I am confident in my ability to excel in a PhD program and make meaningful contributions to the field.

Overview

7
7
years of professional experience
7
7
years of post-secondary education

Work History

Senior Bioinformatics Engineer

Novogene
10.2020 - Current

In the Department of Single-Cell Sequencing

  • Led the bioinformatics team within the single-cell department, overseeing project delivery, pipeline development, and specialized R&D tasks.
  • Acted as the primary bioinformatics lead for collaborative projects, conducting single-cell RNA sequencing data analysis for aplastic anemia.
  • Developed a novel algorithmic tool for defining cell types in single-cell transcriptomics data(https://github.com/Bio-MingChen/novoalgor).
  • Designed and implemented a fully automated bioinformatics analysis pipeline, enabling end-to-end analysis without manual bioinformatics intervention.
  • Contributed to multiple R&D initiatives and pipeline optimizations, resulting in over ten software copyrights and one granted patent.

Advanced Bioinformatics Engineer

Novogene
07.2017 - 10.2020

In the Department of Human Disease Research

  • Conducted and completed various projects and R&D tasks related to whole-exome sequencing (WES) and whole-genome sequencing (WGS).
  • Established a somatic mutation analysis pipeline, enabling the detection and identification of clonal hematopoiesis of indeterminate potential (CHIP) mutations.
  • Served as the primary bioinformatics analyst for a GWAS study on cleft lip and palate.
  • Developed disease-specific reports and a comprehensive disease database.

Education

Master of Science - Stem Cell And Regenerative Medicine

CAMS & PUMC
No. 288 Nanjing Road, Heping District, Tianjin.
09.2014 - 06.2017

Bachelor of Science - Biology Science

Inner Mongolia University (IMU)
Hohhot, Inner Mongolia, China.
09.2010 - 06.2014

Skills

  • Passionate about programming, proficient in Python, Shell, and R for bioinformatics analysis

  • Skilled in website development and web scraping, with experience in frameworks such as Django, Django RESTful, and React to build web services

Familiar with database management, with hands-on experience in MongoDB

  • Achieved an IELTS score of 65, demonstrating strong proficiency in English

Timeline

Senior Bioinformatics Engineer

Novogene
10.2020 - Current

Advanced Bioinformatics Engineer

Novogene
07.2017 - 10.2020

Master of Science - Stem Cell And Regenerative Medicine

CAMS & PUMC
09.2014 - 06.2017

Bachelor of Science - Biology Science

Inner Mongolia University (IMU)
09.2010 - 06.2014
Ming ChenSenior Bioinformatics Engineer