Siddhartha Mitra
New York,NY
Summary
Experienced full stack software engineer with expertise in building object-oriented web applications using Angular, Python, and Django. Proficient in designing solutions for storing and analyzing large data sets. Passionate about the fields of bioinformatics and computational neuroscience, with a strong working knowledge and keen interest in both. Currently employed at Pfizer's vaccine research unit, contributing to the identification of emerging variants and mutations in viruses such as SARS-CoV-2 and influenza. Skilled in utilizing machine learning and deep learning tools for data analysis.
Overview
23
23
years of professional experience
Work History
Software Developer
Pfizer Inc
11.2021 - Current
- Currently working in the vaccine research group as a bioinformatician
- Projects include creating portals for tracking viruses and proteins, and developing web applications for data visualization and analysis.
- Self-motivated, with a strong sense of personal responsibility.
- Worked effectively in fast-paced environments.
Volunteer Software Developer
NYU Neuroscience Dept
03.2020 - Current
- Working with a NYU neuroscience faculty to build an analysis tool for EEG spectral data analysis.
Volunteer Software Developer
Coronawhy.org
03.2020 - Current
- Created the spike protein explorer app for investigating variants of the spike protein in Covid research.
PhD Candidate
SUNY Downstate Medical Center
09.2017 - Current
- Creating a portal for running simulations on biophysically modeled striatal neurons.
Software Developer
Imij Tech Inc
08.2019 - 09.2021
- Involved in creating an interface for analyzing MRI data sets for early diagnosis of neurological disorders.
Biomedical Software Developer
Institute of Next Generation HealthCare at Mount Sinai
01.2018 - 07.2019
- Developed a portal for the multiple myeloma project and managed the Daphni pipeline.
Freelance programmer
New York State Psychiatry Institute
05.2017 - 06.2019
- Upgraded an existing Django portal for uploading and processing MRI and PET scans.
Biomedical Software Developer
Institute of Next Generation HealthCare at Mount Sinai
06.2017 - 12.2018
- Designed and constructed a web portal for the LymeMIND project.
Senior Scientific Programmer
The Rockefeller University
01.2015 - 01.2017
- Designed and constructed web portals for smell disorder survey, molecular connectivity map of the mouse brain, and analysis of RNASeq gene expression data.
Scientific Programmer
Medametrics
10.2009 - 01.2015
- Designed and constructed Chronuxplus, a web-based tool for analysis of large EEG time-series data sets.
Programmer
Seattle Biomedical
09.2008 - 10.2009
- Involved in the SSGCID project for large scale characterization of pathogenic proteins.
Programmer
Standard Insurance
01.2007 - 09.2008
- Worked with J2EE technologies for insurance-related projects.
Masters Thesis
OHSU
08.2006 - 12.2006
- Created a web services tool for retrieving data for genetic sequence analysis.
Programmer
Freightliner
05.2004 - 06.2006
- Project leader for the NAFTA project, working with J2EE technologies.
Programmer
Nike
04.2003 - 04.2004
- Worked with JAVA technologies for Nike projects.
Programmer
Pacificorp
09.2001 - 04.2003
- Worked with JAVA technologies for Pacificorp projects.
Education
PhD candidate in Neuroscience -
01.2022
Masters in Medical Informatics -
01.2007
Masters in Physics -
01.1993
Skills
- Python, Django, Pandas, Linux, MySQL, Angular 9, AWS, R, Matlab
- MySQL, DB2/400, Oracle, SQL-Server, MongoDB
- Problem-Solving
- Programming
- Object-Oriented Programming
- Software Development
Additionalinformation - Volunteer
- Volunteer with AIDNYC: Volunteer for Association for India's Development, NYC Chapter (http://aidnyc.org/), a non-profit dedicated to funding and supporting grassroots projects in India.
- Science: Organized a table about optical illusions in the Science Saturday Science Outreach event at Rockefeller University in 2016. Volunteered for the World Science Festival in 2015 and 2016. Frequent speaker at the NYC Quantum Physics meetup group.
- When time permits: Playing sitar, chess, hiking, biking, yoga, reading physics, biology.
Personal Information
Visa Status: Green card holder. Authorized to work for any employer in the US.
Languages
English
Full Professional
Timeline
Software Developer - Pfizer Inc
11.2021 - Current
Volunteer Software Developer - NYU Neuroscience Dept
03.2020 - Current
Volunteer Software Developer - Coronawhy.org
03.2020 - Current
Software Developer - Imij Tech Inc
08.2019 - 09.2021
Biomedical Software Developer - Institute of Next Generation HealthCare at Mount Sinai
01.2018 - 07.2019
PhD Candidate - SUNY Downstate Medical Center
09.2017 - Current
Biomedical Software Developer - Institute of Next Generation HealthCare at Mount Sinai
06.2017 - 12.2018
Freelance programmer - New York State Psychiatry Institute
05.2017 - 06.2019
Senior Scientific Programmer - The Rockefeller University
01.2015 - 01.2017
Scientific Programmer - Medametrics
10.2009 - 01.2015
Programmer - Seattle Biomedical
09.2008 - 10.2009
Programmer - Standard Insurance
01.2007 - 09.2008
Masters Thesis - OHSU
08.2006 - 12.2006
Programmer - Freightliner
05.2004 - 06.2006
Programmer - Nike
04.2003 - 04.2004
Programmer - Pacificorp
09.2001 - 04.2003
SUNY Downstate Medical Center - PhD candidate in Neuroscience,
Oregon Health Science's University - Masters in Medical Informatics,
Indian Institute of Technology - Masters in Physics,
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