Summary
Overview
Work History
Education
Skills
Timeline
Generic

Andrew Bae

Chapel Hill,NC

Summary

Experienced scientist with over 20 years of expertise in clinical virology, diagnostics, and antiviral drug development, specializing in molecular diagnostic techniques, assay development, assay validations and laboratory management. Ability to collaborate with stakeholders to ensure efficient implementation and operation of diagnostic systems, supporting clinical trials and maintaining regulatory compliance with CLIA and GCLP standards. Skilled in delivering solution-oriented training and technical consultation, fostering strong professional relationships. Extensive background in quality assurance, data accuracy, and scientific analysis through the execution of diagnostic methods. Committed to compliance with quality systems, timely documentation, and maintaining operational efficiency within budgetary guidelines.

Open to field-based travel and dedicated to supporting BioMérieux’s diagnostic product lines through technical field applications support, ensuring business growth and retention

Overview

30
30
years of professional experience

Work History

Lab Research Analyst II

DUKE UNIVERSITY
04.2023 - Current
  • Provide ongoing technical training and support for team members and collaborators in assay development and laboratory management, ensuring efficient implementation and operation of new diagnostic technologies
  • Perform various assays to identifying antibody correlates of protection in support of influenza vaccine research and development under GCLP guidelines.

Research Analyst II

DHVI, Protein Production Facility
03.2020 - 03.2023
  • Performed transfection/infection of insect cell for the production of influenza HA antigens in GCLP laboratory
  • Performed Quality Control of proteins produced in the PPF; perform SDS-PAGE, Western blotting, endotoxin testing and size exclusion chromatography via AKTA instrumentation
  • Performed production and quality control of plasmids and bacmids used for expression of proteins in mammalian and insect cells; transform bacterial cells for plasmid/ bacmid production.

Principal Scientist

CHIMERIX, INC.
02.2016 - 05.2019
  • Ensured data accuracy and regulatory compliance by supporting quality assurance processes and consulting with stakeholders
  • Managed clinical virology and diagnostics analysis for company clinical trials
  • Designed and implemented molecular diagnostic methods, including NGS, PCR, and DNA/RNA isolation techniques and associated instrumentations
  • Developed qPCR and RT-qPCR assays for norovirus, AdV, CMV, and Ectromelia
  • Created sequencing assays for mutation identification and genotype classification
  • Provided technical expertise to external labs for project development and troubleshooting
  • Performed lab operations, including specimen handling, inventory management, equipment calibration, and safety compliance
  • Authored and reviewed technical documents such as SOPs, Virology Plans, and Clinical Virology Reports
  • Collaborated with internal and external scientists on research and implementation of new techniques.
  • Supported development of in-process, raw material and release testing.
  • Conducted genotypic and viral load investigations, standardized testing and instrument qualifications.
  • Maintained laboratory environment, performed investigations and standardized testing.

Sr. Associate Scientist

CHIMERIX, INC.
04.2011 - 02.2016
  • Ensured data accuracy and regulatory compliance by supporting quality assurance processes and consulting with stakeholders
  • Managed clinical virology and diagnostics analysis for company clinical trials
  • Designed and implemented molecular diagnostic methods, including NGS, PCR, and DNA/RNA isolation techniques and associated instrumentations
  • Developed qPCR and RT-qPCR assays for norovirus, AdV, CMV, and Ectromelia
  • Created sequencing assays for mutation identification and genotype classification
  • Provided technical expertise to external labs for project development and troubleshooting
  • Performed lab operations, including specimen handling, inventory management, equipment calibration, and safety compliance
  • Authored and reviewed technical documents such as SOPs, Virology Plans, and Clinical Virology Reports
  • Collaborated with internal and external scientists on research and implementation of new techniques.

Associate Scientist

GILEAD SCIENCES
02.2006 - 12.2010
  • Led clinical diagnostics lab, optimizing workflow to meet HIV and HCV milestones
  • Ensured compliance with CLIA and GCLP through accurate documentation, SOPs, and technical reports
  • Collaborate with Bioinformatics to design a sequence database for HIV and HCV data analysis and reporting
  • Conducted amino acid mutation analysis, reducing susceptibility to anti-HCV drug candidates
  • Molecular diagnostic method development (NGS, PCR, qPCR) to support clinical trials, ensuring regulatory compliance
  • Collaborated with external partners (Virco) on oligonucleotide design and method optimization
  • Worked with cross-functional teams to troubleshoot diagnostic issues, ensuring customer satisfaction and regulatory adherence
  • Awarded 2009 Carolina STAR by NC-DHHS for lab inspection preparedness
  • Negotiated procurement to upgrade lab systems, increasing throughput and reducing costs
  • Played a key role in securing FDA approval for Emtriva by leading resistance analyses during clinical trials
  • Provided training, technical support, and troubleshooting to staff and interns on lab techniques
  • Developed allele-specific qPCR and single-genome sequencing methods to detect low-frequency viral mutations
  • HCV genotyping protocols to detect resistance mutations in NS3, NS4A, and NS5B genes in genotypes 1a and 1b.

Senior Research Associate II

GILEAD SCIENCES
02.2003 - 02.2006
  • Led clinical diagnostics lab, optimizing workflow to meet HIV and HCV milestones
  • Ensured compliance with CLIA and GCLP through accurate documentation, SOPs, and technical reports
  • Collaborate with Bioinformatics to design a sequence database for HIV and HCV data analysis and reporting
  • Conducted amino acid mutation analysis, reducing susceptibility to anti-HCV drug candidates
  • Molecular diagnostic method development (NGS, PCR, qPCR) to support clinical trials, ensuring regulatory compliance
  • Collaborated with external partners (Virco) on oligonucleotide design and method optimization
  • Worked with cross-functional teams to troubleshoot diagnostic issues, ensuring customer satisfaction and regulatory adherence
  • Awarded the 2009 Carolina STAR by NC-DHHS for lab inspection preparedness
  • Played a key role in securing FDA approval for Emtriva by leading resistance analyses during clinical trials
  • Provided training, technical support, and troubleshooting to staff and interns on lab techniques
  • Developed allele-specific qPCR and single-genome sequencing methods to detect low-frequency viral mutations
  • HCV genotyping protocols to detect resistance mutations in NS3, NS4A, and NS5B genes in genotypes 1a and 1b.
  • Designed and executed studies to support usability of solutions, analyze data and provide actionable recommendations to project team.
  • Achieved project objectives by troubleshooting experiments and testing practical and creative solutions.
  • Directed, guided and delegated tasks to teams and developed project schedules, resource requirements and timelines to maintain productivity on goals and objectives.
  • Contributed to scientific discussions with peers and management personnel.
  • Generated and upload assay data and communicated results and reports to multi-disciplinary project teams to influence progression in discovery and development.
  • Developed solutions by researching advanced technologies, methods for modeling and predicting performance outcomes and innovative approaches for personalized and adaptive user support.
  • Communicated project status to [Type] management verbally and through technical documentation and presentations.
  • Initiated, planned and executed research projects under supervision of senior scientist.
  • Gathered and organized information for research purposes.
  • Guided development of adaptive systems framework that integrated data from multiple sources to augment training and operational performance.
  • Leveraged highly effective communication and active listening skills to work effectively scientists of diverse backgrounds and accomplish common research goals.
  • Created and implemented procedures to obtain required information and support research goals.
  • Performed in-depth interviews with research subjects and compiled data and analyses into reports for review by group leader.
  • Completed over [Number] tests on [Type] research participants, recorded findings in [Software] and reported them to supervisors.
  • Assisted [Number] scientists with in-depth data research in both lab and office environments.
  • Implemented [Type] programs to increase public education of [Area of expertise] and share newly developed research findings.
  • Cut research supply costs by $[Amount] through keeping precise and diligent records of supplies used and needed in [Software].
  • Took active role in departmental meetings, engaging with all parties and transcribing detailed notes of plans, decisions and options discussed.
  • Collected and recorded data at various field sites for later assessment and data analysis.
  • Organized [Type] research from start to finish by designing effective questionnaires and data entry procedures.
  • Created over [Number] research summaries and presented them to supervisors to advocate further research and funding.
  • Disseminated research findings to personnel as white papers, presentations and spreadsheets.
  • Used [Software] to enter data into project database and provided regular updates.
  • Digitized and organized [Type] data using [Software] to streamline research procedures.
  • Reviewed and verified [Type] data before entering into database to enhance research quality and accuracy.
  • Utilized statistical packages to analyze data and create visualizations.

Research Scientist II

TRIANGLE PHARMACEUTICALS
01.1998 - 01.2003
  • Developed, optimized and validated the ABI3100 system for HIV-I genotypic analysis
  • Led HIV ENVA proficiency testing program, evaluating new genomic technologies including Affymetrix, Visible Genetics, ALF, Line Probe Assay, ABI377, and ABI3100
  • Specimen handling of biological samples, including bacteria/viruses requiring BSL-2 containment.

Technologist II

LABCORP
01.1995 - 01.1998

ELISA diagnostic assays Amplicor HIV-1 Monitor on infected human blood and plasma specimen to generate HIV data for use in diagnosis and treatment of disease

  • Maintain laboratory operations per GCLP and CLIA guidelines while complying with safety standards
  • Document quality control & results, troubleshoot instrument malfunctions and monitoring result deviations and implement quality assurances.

Education

Bachelor of Biology -

Appalachian State University
1995

Skills

  • SEC
  • ELISA
  • Nucleic Acid Isolation
  • DNA-RNA Extraction
  • RNA, DNA sequencing
  • RT-qPCR
  • Assay Development
  • PCR amplification
  • Real-Time qPCR
  • Mutation Analysis
  • Polymorphism Analysis
  • Cell Culture
  • Scientific Writing
  • Data Analysis
  • Project Management
  • Laboratory Management
  • Genotypic Analysis
  • Phenotypic Analysis
  • Primer Design
  • Site-Directed Mutagenesis
  • Genome Sequencing
  • Cloning
  • MS Excel
  • Word
  • PowerPoint
  • Sequencing Applications
  • Plasmid Transformation

Timeline

Lab Research Analyst II

DUKE UNIVERSITY
04.2023 - Current

Research Analyst II

DHVI, Protein Production Facility
03.2020 - 03.2023

Principal Scientist

CHIMERIX, INC.
02.2016 - 05.2019

Sr. Associate Scientist

CHIMERIX, INC.
04.2011 - 02.2016

Associate Scientist

GILEAD SCIENCES
02.2006 - 12.2010

Senior Research Associate II

GILEAD SCIENCES
02.2003 - 02.2006

Research Scientist II

TRIANGLE PHARMACEUTICALS
01.1998 - 01.2003

Technologist II

LABCORP
01.1995 - 01.1998

Bachelor of Biology -

Appalachian State University
Andrew Bae