Summary
Overview
Work History
Education
Skills
Websites
Current Positions
Academic Accolades
Teaching Courses
Key Publications
Conferences And Workshops Organized
Poster Oral Presentations
Invited Lectures
Orcid
Others
Hobbies and Interests
Hobbies
Timeline
Generic

Pankaj Singh Dholaniya

Columbus,OH

Summary

Insightful Research Fellow specializing in field of Bioinformatics and Machine Learning. Successful at planning, executing and analyzing research. Brings knowledge and experience in peer-reviewed publication. Always looking for ways to improve studies and validity of results.

Overview

7
7
years of professional experience

Work History

Postdoctoral researcher

Emergency Medicine Department, Ohio State University
05.2023 - Current

Assistant Professor

Department of Biotechnology and Bioinformatics, School of Life Sciences, University of Hyderabad
01.2017 - Current
  • Teaching courses: Computers and Programming, Machine learning methods and Data analytics, Database design and development

Education

Ph.D. - Biotechnology

University of Hyderabad
Hyderabad, Telangana
01.2017

M. Tech - Bioinformatics

University of Hyderabad
Hyderabad, Telangana
01.2011

B. Tech - Biotechnology

SVBP University of Agri. & Tech.
Meerut, U.P.
01.2009

Skills

  • Computer Programming: R, Python, Perl, C
  • Machine learning in R and Python and statistical analysis
  • NGS Data Analysis, Single-cell RNA-Seq sequencing data analysis
  • Databases and Web development: PHP, XAMPP, MYSQL, JavaScript, HTML, CSS
  • Molecular biology and cell culture techniques (PCR, RTPCR, DNA/RNA isolation etc)
  • Team management and project supervision

Current Positions

  • Assistant Professor, Department of Biotechnology and Bioinformatics, School of Life Sciences, University of Hyderabad, Hyderabad, Telangana, INDIA, 01/2017, Present
  • Postdoctoral researcher, Emergency Medicine Department, Ohio State University, Columbus, Ohio, USA, 05/2023, Present

Academic Accolades

  • Biotechnology Eligibility Test (DBT-JRF) 2010 and 2009.
  • CSIR - NET Lectureship exam, June 2010
  • GATE (Graduate Aptitude Test for Engineering) -2009
  • Received DAAD (German Academic Exchange Service) fellowship under student exchange program of the University of Hyderabad (UoH), India and Westfälische Wilhelms-Universität Münster (WWU), for three months (07/01/2012 to 09/30/2012).

Teaching Courses

  • Computers and Programming
  • Machine learning methods and Data analytics
  • Database design and development

Key Publications

  • Kumari B, Dholaniya PS
  • Parkinson's disease gene prioritising using an efficient and biologically appropriate network-based consensus strategy, Journal of Computational Science, 10.1016/j.jocs.2022.101879, 2022
  • Neha S, Ahmad M, Kumari B, Zainul Ali MD, Dholaniya PS
  • Early diagnosis of Parkinson's Disease: Utility of animal models, Parkinson's Disease - Animal Models, Current Therapies and Clinical Trials, IntechOpen, 10.5772/intechopen.107887, 2022
  • Zainul Ali MD, Dholaniya PS
  • Oxidative phosphorylation mediated pathogenesis of Parkinson's disease and its implication via Akt signaling, Neurochemistry International, Elsevier, 10.1016/j.neuint.2022.105344, 2022
  • Neha S, Dholaniya PS
  • The Prevailing Role of Topoisomerase 2 Beta and its Associated Genes in Neurons, Molecular Neurobiology, 10.1007/s12035-021-02561-0, 2021
  • Dholaniya PS
  • Rizvi S, Effect of various sequence descriptors in predicting human protein-protein interactions using ANN-based prediction models, Current Bioinformatics, 10.2174/1574893616666210402114623, 2021
  • Gupta P#, Dholaniya PS#, Devulapalli S, Tawari NR, Sreelakshmi Y, Sharma R, Reanalysis of genome sequences of tomato accessions and its wild relatives: development of Tomato Genomic Variation (TGV) database integrating SNPs and INDELs polymorphisms, Bioinformatics, 10.1093/bioinformatics/btaa617, 2020
  • Kakade A, Kumari B, Dholaniya PS
  • Feature selection using logistic regression in case-control DNA methylation data of Parkinson's disease: A comparative study, J Theor Biol, 10.1016/j.jtbi.2018.08.018, 2018
  • Gupta KP, Dholaniya PS, Chekuri A, Kondapi AK, Analysis of gene expression during aging of CGNs in culture: implication of SLIT2 and NPY in senescence, Age (Omaha), 10.1007%2Fs11357-015-9789-6, 2015
  • Dholaniya PS, Ghosh S, Surampudi BR, Kondapi AK, A knowledge driven supervised learning approach to identify gene network of differentially up-regulated genes during neuronal senescence in Rattus norvegicus, Biosystems, 10.1016/j.biosystems.2015.07.002, 2015

Conferences And Workshops Organized

  • Workshop on Data Science Basics Using R, 12/20/2020, 12/24/2020, Online, FABA, academy and Department of Biotechnology and Bioinformatics, School of Life Sciences, University of Hyderabad
  • Data Science Workshop, 12/21/2019, 12/24/2019, University of Hyderabad, Hyderabad
  • GIAN workshop on Algorithms and Methods in Biological data, 02/09/2019, 02/24/2019, University of Hyderabad, Hyderabad
  • International Conference on Biology And Therapeutics of HIV & Associated Infections, 01/19/2019, 01/21/2019, University of Hyderabad, Hyderabad
  • Workshop on Data Science in Biomedical Research, 12/19/2018, 12/23/2018, University of Hyderabad, Hyderabad
  • Data Science Workshop, 12/19/2017, 12/22/2017, University of Hyderabad, Hyderabad

Poster Oral Presentations

  • BioQuest-2015, 09/23/2015, School of Life Sciences, University of Hyderabad
  • National Conference on Current Status & Recent Advances in Medicinal and Aromatic Plants Research, 02/17/2012, Gandhi Medical College, Hyderabad, A.P. India
  • DRILS Science café-2015, 08/10/2015, Dr. Reddy's Institute of Life Sciences, University of Hyderabad campus, Best Poster Award
  • Indo-Taiwan Joint interdisciplinary Neuroscience Symposium, 01/09/2014, University of Hyderabad
  • Indo-Japan joint workshop, 12/16/2013, University of Hyderabad
  • UOH-AS (Academia Sinica) Joint workshop on Frontiers in Biological Sciences, 04/2013, University of Hyderabad
  • Bio Quest 2010, 03/20/2010, University of Hyderabad, Hyderabad

Invited Lectures

  • Supervised learning and decision trees for classification: Applications in Gene/protein interaction networks, 03/2022, Online Faculty Development Programme (FDP) on Recent Developments in Computational Biology, Department of Data Science and Intelligent Systems-IIIT Dharwad in association with Electronics & ICT Academy, NIT Warangal
  • Machine learning in Genomics, 02/22/2020, Workshop on Artificial Intelligence in Genomics, Sri Padmavati Vishvavidyalayam, Tirupati
  • Predicting protein-protein interactions: Computational approaches, 02/2019, GIAN workshop on Algorithms and Methods in Biological data, University of Hyderabad, Hyderabad
  • Bioinformatics-Approaches in Metagenome Analysis, 08/30/2018, Environment Protection Training and Research Institute, Hyderabad

Orcid

0000-0001-8615-9861

Others

  • Radhika M, Vengala Rao Y, Nupur N, Dholaniya PS, et.al., Comprehensive analysis of serum small extracellular vesicles-derived coding and non-coding RNAs from Retinoblastoma patients for identifying regulatory interactions, Cancers, 10.3390/cancers14174179, 2022
  • Gupta P, Dholaniya PS, Princy K, Madhavan AS, Sreelakshmi Y, Sharma R, Whole-Genome Profiling of Ethyl Methanesulfonate Mutagenesis in Tomato, BioRxiv, 10.1101/2022.04.19.488728v1, 2022
  • Muttineni R#, Kammili N#, Bingi TC#, Rao M#, Kalyani P#, Dholaniya PS# et al., Clinical and whole genome characterization of SARS-CoV-2 in India, PLoS One, 10.1371/journal.pone.0246173, 2021
  • Gupta P#, Dholaniya PS#, Devulapalli S, Tawari NR, Sreelakshmi Y, Sharma R, Reanalysis of genome sequences of tomato accessions and its wild relatives: development of Tomato Genomic Variation (TGV) database integrating SNPs and INDELs polymorphisms, Bioinformatics, 10.1093/bioinformatics/btaa617, 2020

Hobbies and Interests

  • Theoretical and Data Biology
  • Data science in Bioinformatics
  • Application of machine learning methods and multi-omics approach for understanding disease mechanisms.
  • Understanding the mechanism of neuronal senescence and age-associated neurological disorders

Hobbies

Painting & Drawing

Timeline

Postdoctoral researcher

Emergency Medicine Department, Ohio State University
05.2023 - Current

Assistant Professor

Department of Biotechnology and Bioinformatics, School of Life Sciences, University of Hyderabad
01.2017 - Current

Ph.D. - Biotechnology

University of Hyderabad

M. Tech - Bioinformatics

University of Hyderabad

B. Tech - Biotechnology

SVBP University of Agri. & Tech.
Pankaj Singh Dholaniya