Summary
Overview
Work History
Education
Skills
Publications
Accomplishments
Affiliations
Certification
Languages
Timeline
Generic

Saibal Chanda

College Station,TX

Summary

As a Ph.D. Candidate and Graduate Research Assistant at Texas A&M University, I am at the forefront of biochemistry and biophysics research, specializing in the development of next-generation ubiquitin activity-based probes. My work focuses on mapping deubiquitinases and other cysteine enzymes involved in the ubiquitin-proteasome pathway, contributing to the advancement of chemical biology through innovative tool design and mechanistic insight.

Overview

9
9
years of professional experience
1
1
Certification

Work History

PhD Candidate

Texas A&M University
College Station, TX
08.2021 - Current
  • Developed Azapeptide-based Ubiquitin Probes for Cysteine Enzymes involved in Ubiquitin and Ubiquitin-like Proteins Signal Pathway.
  • Developed Fluorogenic Substrates for assessing activities of Deubiquitinases and Ub-like Protein specific Proteases.
  • Drug Discovery for E1, E2, E3 and Deubiquitinases and role of the Ubiquitin System in health and diseases.
  • Development of Peptide-based Inhibitors for HIV.

Senior Research Associate

Syngene International, Biocon Biologics Ltd.
Bangalore, India
08.2018 - 02.2021

Trastuzumab Emtansine, Etanercept, Pembrolizumab, Tocilizumab, Ipilimumab, Plasmodium vivax duffy binding protein, and Follicle Stimulating Hormone.

  • Performed Physico-Chemical Characterization and Quality Control of therapeutic mAbs and proteins across Drug Substance (DS), Drug Product (DP), and Fill-Finished Product (FP) stages.
  • Performed Analytical Method Validation and executed Technology Transfers to ensure compliance. Review of Analytical Data, Preparation and Review of Method Validation, Tech-transfer Protocol & Report.
  • Executed Comprehensive Characterization Studies to evaluate the Purity and Stability (Real-time, Accelerated/Stress condition) of therapeutic mAbs.
  • Implementation of QMS: Fish-bone tool, 5-Whys, Preparation and Review of Laboratory Incidents, Deviation reports, Out-of-Specification (OOS), Out of Trend (OOT), Change Control, CAPA
  • Drafted and reviewed Standard Operating Procedures (SOPs) and Standard Testing Procedures (STPs) for laboratory operations.
  • Trained new personnel in Laboratory Procedures, Safety Protocols, Instrument Operation, and relevant Software Applications under cGMP regulations.

Assistant Manager

Dr. Reddy's Laboratory
Hyderabad, India
08.2016 - 08.2018

Rituximab, Bevacizumab, Trastuzumab, Adalimumab, Filgrastim, PegFilgrastim, Darbepoetin-alpha

  • Collaborated with management on developing strategic plans for achieving business goals.
  • Executed cGMP Biochemical and Chromatographic Characterizations of Biotherapeutics across Drug Substances (DS), Drug Products (DP) stages.
  • Performed Technology Transfer and Analytical Method Validation.
  • Performed Physico-Chemical Characterizations of therapeutics during Clinical Trials and Product Launch Campaigns.
  • Real-time and Accelerated Stability Studies and Characterization of mAbs at DS, DP, and FP Stages.
  • Implementation of QMS Compliance, Regulatory Affairs, and Audit Support

Education

Master of Science - Biotechnology

Madurai Kamaraj University
India
06-2016

Ph.D. - Biochemistry And Biophysics

Texas A&M University
College Station, TX

Skills

Techniques:

  • LC-MS, Proteomics and Peptide Mapping, SE-HPLC, RP-HPLC, IEX-HPLC, Protein A-HPLC, HIC-HPLC, and Capillary Gel Electrophoresis (CE-SDS)
  • CD spectroscopy, FRET, RT-PCR, ELISA, Western Blot
  • Animal Cell Culture, Transient Transfection, Cloning, Protein Expression & Purification
  • Chemical Ligation Methods

Instruments:

  • Orbitrap LC-MS, Orbitrap Exploris 480, Waters HPLC, Waters Acquity UPLC, Agilent HPLC, Akta, Shimadzu LC, Beckman Coulter PA 800 CE SDS

Softwares:

  • Chromeleon 7, Empower 3, Xcalibur, Unicorn, 32 Karat, Proteome Discoverer

Publications

  • Chanda. S et al. Ubiquitin Azapeptide Esters as Next-Generation Activity-Based Probes for Cysteine Enzymes in the Ubiquitin Signal Pathway, JACS, 2025, 147 (21), 17817-17827. Featured in the Cover Page of this issue.
  • Guria. A et al. Circular RNA Profiling by Illumina Sequencing via Template-Dependent Multiple Displacement Amplification, Biomed Research International, 2019, DOI: 10.1155/2019/2756516

Accomplishments

Graduate Student Travel Award for American Peptide Society Symposium, Texas A&M University, 2025

Dr. Kalam Anji Reddy Excellence Award, Dr. Reddy's Laboratories, 2018

GATE Fellowship, Indian Institute of Science, Bangalore, 2016

Department of Biotechnology Scholarship, Govt. Of India, 2014-2016

Affiliations

  • Served as a Trained First-Aider and Fire Fighter in Syngene International, Biocon.
  • Life Member of Dr. Reddy's Foundation.

Certification

People and Soft Skills for Professional and Personal Success Specialization, IBM, 2025

Six Sigma Green Belt

GE Fast-track on Protein Chromatography, GE Healthcare, 2016

Languages

English
Full Professional
Bengali
Native/ Bilingual

Timeline

PhD Candidate

Texas A&M University
08.2021 - Current

Senior Research Associate

Syngene International, Biocon Biologics Ltd.
08.2018 - 02.2021

Assistant Manager

Dr. Reddy's Laboratory
08.2016 - 08.2018

Master of Science - Biotechnology

Madurai Kamaraj University

Ph.D. - Biochemistry And Biophysics

Texas A&M University
Saibal Chanda